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gaps 0.6.11 documentation
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Installation and Usage
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Installation and Usage
Examples
API reference
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gaps.batch
gaps.batch.BatchJob
gaps.batch.BatchSet
gaps.cli
gaps.cli.batch
gaps.cli.batch.batch_command
gaps.cli.cli
gaps.cli.cli.as_click_command
gaps.cli.cli.make_cli
gaps.cli.collect
gaps.cli.collect.collect
gaps.cli.command
gaps.cli.command.CLICommandConfiguration
gaps.cli.command.AbstractBaseCLICommandConfiguration
gaps.cli.command.CLICommandFromClass
gaps.cli.command.CLICommandFromFunction
gaps.cli.config
gaps.cli.config.as_script_str
gaps.cli.config.from_config
gaps.cli.config.node_kwargs
gaps.cli.config.run_with_status_updates
gaps.cli.documentation
gaps.cli.documentation.CommandDocumentation
gaps.cli.execution
gaps.cli.execution.kickoff_job
gaps.cli.pipeline
gaps.cli.pipeline.pipeline
gaps.cli.pipeline.pipeline_command
gaps.cli.pipeline.template_pipeline_config
gaps.cli.preprocessing
gaps.cli.preprocessing.preprocess_collect_config
gaps.cli.preprocessing.preprocess_script_config
gaps.cli.preprocessing.split_project_points_into_ranges
gaps.cli.reset
gaps.cli.reset.reset_command
gaps.cli.script
gaps.cli.script.script
gaps.cli.status
gaps.cli.status.main_monitor
gaps.cli.status.status_command
gaps.cli.templates
gaps.cli.templates.template_command
gaps.collection
gaps.collection.find_h5_files
gaps.collection.parse_gids_from_files
gaps.collection.parse_meta
gaps.collection.parse_project_points
gaps.collection.Collector
gaps.collection.DatasetCollector
gaps.config
gaps.config.ConfigType
gaps.config.config_as_str_for_docstring
gaps.config.init_logging_from_config_file
gaps.config.load_config
gaps.config.resolve_all_paths
gaps.config.ConfigType
gaps.config.Handler
gaps.config.JSON5Handler
gaps.config.JSONHandler
gaps.config.TOMLHandler
gaps.config.YAMLHandler
gaps.exceptions
gaps.exceptions.gapsConfigError
gaps.exceptions.gapsError
gaps.exceptions.gapsExecutionError
gaps.exceptions.gapsFileNotFoundError
gaps.exceptions.gapsHPCError
gaps.exceptions.gapsIOError
gaps.exceptions.gapsIndexError
gaps.exceptions.gapsKeyError
gaps.exceptions.gapsRuntimeError
gaps.exceptions.gapsTypeError
gaps.exceptions.gapsValueError
gaps.hpc
gaps.hpc.DEFAULT_STDOUT_PATH
gaps.hpc.format_env
gaps.hpc.format_walltime
gaps.hpc.make_sh
gaps.hpc.submit
gaps.hpc.COMMANDS
gaps.hpc.HpcJobManager
gaps.hpc.PBS
gaps.hpc.Q_COLUMNS
gaps.hpc.SLURM
gaps.legacy
gaps.legacy.BatchJob
gaps.legacy.HardwareStatusRetriever
gaps.legacy.Pipeline
gaps.legacy.Status
gaps.legacy.PipelineError
gaps.log
gaps.log.FORMAT
gaps.log.add_handlers
gaps.log.init_logger
gaps.log.log_mem
gaps.log.log_versions
gaps.log.make_handler
gaps.log.make_log_file_handler
gaps.log.make_log_stream_handler
gaps.log.print_logging_info
gaps.log.print_logging_info_all_libraries
gaps.pipeline
gaps.pipeline.parse_previous_status
gaps.pipeline.Pipeline
gaps.pipeline.PipelineStep
gaps.project_points
gaps.project_points.ProjectPoints
gaps.status
gaps.status.HardwareOption
gaps.status.HardwareStatusRetriever
gaps.status.QOSOption
gaps.status.Status
gaps.status.StatusField
gaps.status.StatusOption
gaps.status.StatusUpdates
gaps.utilities
gaps.utilities.project_points_from_container_or_slice
gaps.utilities.recursively_update_dict
gaps.utilities.resolve_path
gaps.utilities.CaseInsensitiveEnum
gaps.version
gaps.warnings
gaps.warnings.gapsCollectionWarning
gaps.warnings.gapsDeprecationWarning
gaps.warnings.gapsHPCWarning
gaps.warnings.gapsWarning
gaps
gaps.log
gaps.log.log...
gaps.log.log_versions
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#
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log_versions()